load_pkg_chemical_hierarchy()

Load chemical class hierarchy from a TSV file.

Usage

Source

load_pkg_chemical_hierarchy(file_path="scratch/wikidata_classes_taxonomy.tsv")

The file should have at least 3 columns, where: - Column 2 (index 1): Class URI - Column 3 (index 2): Parent URI

Parameters

file_path: str | Path = "scratch/wikidata_classes_taxonomy.tsv"
Default is ‘scratch/wikidata_classes_taxonomy.tsv’.

Returns

dict[str, list[str]]
URIs.

Raises

DataLoadingError
If the file cannot be read or parsed.